Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Gm1335-201ENSMUST00000121653 386 ntBASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Olfr582-201ENSMUST00000098212 960 ntBASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb5Q91XZ5 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Gm4271-201ENSMUST00000174444 973 ntBASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Gm42929-201ENSMUST00000198374 1286 ntBASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb5Q91XZ5 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Mir1247-201ENSMUST00000116706 82 ntBASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Gm7399-201ENSMUST00000032395 858 ntBASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pcdhb5Q91XZ5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pcdhb5Q91XZ5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms