Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Gm15653-201ENSMUST00000119247 907 ntBASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Gm37714-201ENSMUST00000194742 342 ntBASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Gm5779-201ENSMUST00000218467 910 ntBASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Pcdhga11Q91XY8 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga11Q91XY8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhga11Q91XY8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga11Q91XY8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhga11Q91XY8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Pcdhga11Q91XY8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Pcdhga11Q91XY8 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.27□□□□□ -0.28
Pcdhga11Q91XY8 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga11Q91XY8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga11Q91XY8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Pcdhga11Q91XY8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Gm6916-202ENSMUST00000205523 195 ntBASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Pcdhga11Q91XY8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms