Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Pcdhga3Q91XY5 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Gm5867-201ENSMUST00000063197 592 ntBASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Pcdhga3Q91XY5 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Gm27533-201ENSMUST00000183800 152 ntBASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdhga3Q91XY5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdhga3Q91XY5 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms