Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.1□□□□□ -0.15
Usp3Q91W36 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.1□□□□□ -0.15
Usp3Q91W36 Gm42651-201ENSMUST00000199851 1339 ntBASIC14.1□□□□□ -0.15
Usp3Q91W36 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Usp3Q91W36 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.09□□□□□ -0.15
Usp3Q91W36 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp3Q91W36 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.09□□□□□ -0.15
Usp3Q91W36 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.09□□□□□ -0.15
Usp3Q91W36 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Usp3Q91W36 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp3Q91W36 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.09□□□□□ -0.15
Usp3Q91W36 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp3Q91W36 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.09□□□□□ -0.15
Usp3Q91W36 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Usp3Q91W36 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Usp3Q91W36 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Gm28911-201ENSMUST00000188837 117 ntBASIC14.09□□□□□ -0.15
Usp3Q91W36 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.09□□□□□ -0.15
Usp3Q91W36 Gm42726-201ENSMUST00000202274 1286 ntTSL 5 BASIC14.09□□□□□ -0.15
Usp3Q91W36 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC14.09□□□□□ -0.15
Usp3Q91W36 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.09□□□□□ -0.15
Usp3Q91W36 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Usp3Q91W36 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Usp3Q91W36 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.09□□□□□ -0.15
Usp3Q91W36 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Usp3Q91W36 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp3Q91W36 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp3Q91W36 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp3Q91W36 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp3Q91W36 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Usp3Q91W36 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Usp3Q91W36 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Usp3Q91W36 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp3Q91W36 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.08□□□□□ -0.16
Usp3Q91W36 Gm11918-201ENSMUST00000121660 179 ntBASIC14.08□□□□□ -0.16
Usp3Q91W36 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.08□□□□□ -0.16
Usp3Q91W36 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.08□□□□□ -0.16
Usp3Q91W36 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC14.08□□□□□ -0.16
Usp3Q91W36 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC14.08□□□□□ -0.16
Usp3Q91W36 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Usp3Q91W36 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Usp3Q91W36 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Usp3Q91W36 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Usp3Q91W36 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.07□□□□□ -0.16
Usp3Q91W36 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Usp3Q91W36 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.07□□□□□ -0.16
Usp3Q91W36 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Usp3Q91W36 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms