Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Gm27437-201ENSMUST00000183429 107 ntBASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pcdhb21Q91V48 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Gm21854-201ENSMUST00000179901 471 ntBASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Gm9797-201ENSMUST00000052902 613 ntBASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Pcdhb21Q91V48 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb21Q91V48 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb21Q91V48 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb21Q91V48 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb21Q91V48 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb21Q91V48 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb21Q91V48 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Pcdhb21Q91V48 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Gm16215-201ENSMUST00000161990 637 ntBASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Gm17795-201ENSMUST00000214505 757 ntBASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pcdhb21Q91V48 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb21Q91V48 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms