Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Rpa1Q8VEE4 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Gm32390-201ENSMUST00000212713 1172 ntBASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Rpa1Q8VEE4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Rpa1Q8VEE4 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rpa1Q8VEE4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms