Protein–RNA interactions for Protein: Q8VE99

Ccdc115, Coiled-coil domain-containing protein 115, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc115Q8VE99 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ccdc115Q8VE99 Gm44241-201ENSMUST00000203230 1662 ntBASIC12□□□□□ -0.49
Ccdc115Q8VE99 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Gm10327-201ENSMUST00000105222 1002 ntBASIC12□□□□□ -0.49
Ccdc115Q8VE99 Gm2810-201ENSMUST00000118681 990 ntBASIC12□□□□□ -0.49
Ccdc115Q8VE99 Gm12882-201ENSMUST00000121696 517 ntBASIC12□□□□□ -0.49
Ccdc115Q8VE99 Gm5069-202ENSMUST00000192714 1011 ntBASIC12□□□□□ -0.49
Ccdc115Q8VE99 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Gm45612-201ENSMUST00000211320 160 ntBASIC12□□□□□ -0.49
Ccdc115Q8VE99 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Gm13730-201ENSMUST00000121036 1462 ntBASIC12□□□□□ -0.49
Ccdc115Q8VE99 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ccdc115Q8VE99 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Gm38225-201ENSMUST00000194001 393 ntBASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Gm44771-201ENSMUST00000206975 626 ntBASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Gm10175-201ENSMUST00000086013 645 ntBASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Ccdc115Q8VE99 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ccdc115Q8VE99 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc115Q8VE99 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc115Q8VE99 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ccdc115Q8VE99 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms