Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Gm9103-201ENSMUST00000119371 405 ntBASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 CT009757.3-201ENSMUST00000223367 2320 ntBASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc9Q8VC31 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Gm12644-201ENSMUST00000119935 606 ntBASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Gm28033-201ENSMUST00000184224 96 ntBASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc9Q8VC31 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 AC122860.2-201ENSMUST00000217967 2671 ntBASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 AC155298.2-201ENSMUST00000225485 6226 ntBASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc9Q8VC31 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Gm44806-201ENSMUST00000205574 2303 ntBASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Gm8655-201ENSMUST00000221159 852 ntBASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc9Q8VC31 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms