Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccdc58Q8R3Q6 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Gm9385-201ENSMUST00000117563 472 ntBASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Gm28659-201ENSMUST00000188013 759 ntBASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccdc58Q8R3Q6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccdc58Q8R3Q6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Ccdc58Q8R3Q6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc58Q8R3Q6 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc58Q8R3Q6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc58Q8R3Q6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc58Q8R3Q6 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Ccdc58Q8R3Q6 Gm15957-201ENSMUST00000118893 974 ntBASIC12.27□□□□□ -0.45
Ccdc58Q8R3Q6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms