Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Gm13385-201ENSMUST00000121089 220 ntBASIC13□□□□□ -0.33
Ubqln1Q8R317 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Gm24420-201ENSMUST00000176676 59 ntBASIC13□□□□□ -0.33
Ubqln1Q8R317 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Gm4971-201ENSMUST00000205991 1108 ntBASIC13□□□□□ -0.33
Ubqln1Q8R317 Gm5186-201ENSMUST00000218781 920 ntBASIC13□□□□□ -0.33
Ubqln1Q8R317 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ubqln1Q8R317 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ubqln1Q8R317 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.99□□□□□ -0.33
Ubqln1Q8R317 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ubqln1Q8R317 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Gm27838-201ENSMUST00000184829 128 ntBASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ubqln1Q8R317 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms