Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Gm19184-201ENSMUST00000196798 928 ntBASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 CU024892.2-201ENSMUST00000224608 832 ntBASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Chmp7Q8R1T1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Gm11960-202ENSMUST00000181063 2858 ntBASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Gm15544-201ENSMUST00000118776 1531 ntBASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Gm10040-201ENSMUST00000080726 1662 ntBASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Chmp7Q8R1T1 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Gm13369-201ENSMUST00000119442 987 ntBASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Gm12134-201ENSMUST00000122109 520 ntBASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Gm37922-201ENSMUST00000195596 455 ntBASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Chmp7Q8R1T1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.42■□□□□ 0.38
Chmp7Q8R1T1 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms