Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Gm44608-201ENSMUST00000206827 855 ntBASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Matn2-203ENSMUST00000226766 3252 ntBASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ebf4Q8K4J2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Paupar-201ENSMUST00000194826 3482 ntBASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.46□□□□□ -0.41
Ebf4Q8K4J2 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Ebf4Q8K4J2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Gm7230-201ENSMUST00000173026 815 ntBASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Gm7461-201ENSMUST00000058918 827 ntBASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Ebf4Q8K4J2 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms