Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CopaQ8CIE6 Gm37844-201ENSMUST00000192473 4097 ntBASIC14□□□□□ -0.17
CopaQ8CIE6 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CopaQ8CIE6 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CopaQ8CIE6 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CopaQ8CIE6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CopaQ8CIE6 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Gm45667-201ENSMUST00000210380 1316 ntBASIC14□□□□□ -0.17
CopaQ8CIE6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Gm42928-201ENSMUST00000197338 3339 ntBASIC14□□□□□ -0.17
CopaQ8CIE6 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CopaQ8CIE6 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14□□□□□ -0.17
CopaQ8CIE6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14□□□□□ -0.17
CopaQ8CIE6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14□□□□□ -0.17
CopaQ8CIE6 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14□□□□□ -0.17
CopaQ8CIE6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CopaQ8CIE6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14□□□□□ -0.17
CopaQ8CIE6 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14□□□□□ -0.17
CopaQ8CIE6 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Gm38094-201ENSMUST00000195864 2978 ntBASIC14□□□□□ -0.17
CopaQ8CIE6 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CopaQ8CIE6 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CopaQ8CIE6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CopaQ8CIE6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Gm12490-201ENSMUST00000120255 560 ntBASIC13.99□□□□□ -0.17
CopaQ8CIE6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CopaQ8CIE6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Gm33320-201ENSMUST00000192232 530 ntBASIC13.98□□□□□ -0.17
CopaQ8CIE6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.98□□□□□ -0.17
CopaQ8CIE6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CopaQ8CIE6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms