Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.22□□□□□ -0.45
ShfQ8CG80 Gm13385-201ENSMUST00000121089 220 ntBASIC12.22□□□□□ -0.45
ShfQ8CG80 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.22□□□□□ -0.45
ShfQ8CG80 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Gm8927-201ENSMUST00000181978 981 ntBASIC12.22□□□□□ -0.45
ShfQ8CG80 Gm6283-201ENSMUST00000182369 1000 ntBASIC12.22□□□□□ -0.45
ShfQ8CG80 Gm28630-201ENSMUST00000187806 498 ntBASIC12.22□□□□□ -0.45
ShfQ8CG80 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.22□□□□□ -0.45
ShfQ8CG80 Gm10253-201ENSMUST00000194270 940 ntBASIC12.22□□□□□ -0.45
ShfQ8CG80 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Gm3222-201ENSMUST00000071282 990 ntBASIC12.22□□□□□ -0.45
ShfQ8CG80 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ShfQ8CG80 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.22□□□□□ -0.45
ShfQ8CG80 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.21□□□□□ -0.45
ShfQ8CG80 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.21□□□□□ -0.45
ShfQ8CG80 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.21□□□□□ -0.45
ShfQ8CG80 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.21□□□□□ -0.45
ShfQ8CG80 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ShfQ8CG80 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.21□□□□□ -0.45
ShfQ8CG80 Gm15693-201ENSMUST00000120470 637 ntBASIC12.21□□□□□ -0.45
ShfQ8CG80 Gm4804-201ENSMUST00000182234 999 ntBASIC12.21□□□□□ -0.45
ShfQ8CG80 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.21□□□□□ -0.45
ShfQ8CG80 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Gm9229-201ENSMUST00000222777 126 ntBASIC12.21□□□□□ -0.45
ShfQ8CG80 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
ShfQ8CG80 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.21□□□□□ -0.45
ShfQ8CG80 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ShfQ8CG80 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
ShfQ8CG80 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.21□□□□□ -0.45
ShfQ8CG80 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ShfQ8CG80 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShfQ8CG80 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ShfQ8CG80 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShfQ8CG80 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ShfQ8CG80 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShfQ8CG80 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShfQ8CG80 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.46
ShfQ8CG80 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
ShfQ8CG80 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
ShfQ8CG80 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
ShfQ8CG80 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.2□□□□□ -0.46
ShfQ8CG80 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
ShfQ8CG80 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.2□□□□□ -0.46
ShfQ8CG80 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms