Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc87Q8CDL9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Gm44719-201ENSMUST00000206404 149 ntBASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc87Q8CDL9 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ccdc87Q8CDL9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ccdc87Q8CDL9 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms