Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vcpip1Q8CDG3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Gm15653-201ENSMUST00000119247 907 ntBASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Gm11424-201ENSMUST00000121929 829 ntBASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Gm6916-202ENSMUST00000205523 195 ntBASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 AC154806.6-201ENSMUST00000228192 202 ntBASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vcpip1Q8CDG3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Gm29741-201ENSMUST00000192667 421 ntBASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.73□□□□□ -0.05
Vcpip1Q8CDG3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Vcpip1Q8CDG3 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms