Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Gm15920-201ENSMUST00000118998 402 ntBASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Gm13385-201ENSMUST00000121089 220 ntBASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Sh3rf3Q8C120 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Gm20949-201ENSMUST00000206478 952 ntBASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Sh3rf3Q8C120 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf3Q8C120 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf3Q8C120 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.27□□□□□ -0.12
Sh3rf3Q8C120 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf3Q8C120 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf3Q8C120 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf3Q8C120 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf3Q8C120 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Sh3rf3Q8C120 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.27□□□□□ -0.12
Sh3rf3Q8C120 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Sh3rf3Q8C120 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Mir698-201ENSMUST00000102164 109 ntBASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Gm9522-201ENSMUST00000182394 926 ntBASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Sh3rf3Q8C120 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Sh3rf3Q8C120 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms