Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Mir8102-201ENSMUST00000184148 139 ntBASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Gm27838-201ENSMUST00000184829 128 ntBASIC14.13□□□□□ -0.15
Trub1Q8C0D0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trub1Q8C0D0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Gm21854-201ENSMUST00000179901 471 ntBASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trub1Q8C0D0 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.11□□□□□ -0.15
Trub1Q8C0D0 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Gm14719-201ENSMUST00000121891 340 ntBASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Mir7023-201ENSMUST00000185093 64 ntBASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Gm20445-201ENSMUST00000061905 565 ntBASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.11□□□□□ -0.15
Trub1Q8C0D0 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trub1Q8C0D0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms