Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp43Q8BUM9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.88□□□□□ -0.19
Usp43Q8BUM9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Usp43Q8BUM9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Usp43Q8BUM9 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp43Q8BUM9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp43Q8BUM9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp43Q8BUM9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp43Q8BUM9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.88□□□□□ -0.19
Usp43Q8BUM9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp43Q8BUM9 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Usp43Q8BUM9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Usp43Q8BUM9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Gm9797-201ENSMUST00000052902 613 ntBASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Acot6-202ENSMUST00000222921 3622 ntBASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Usp43Q8BUM9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Gm15770-201ENSMUST00000117498 584 ntBASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.86□□□□□ -0.19
Usp43Q8BUM9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Usp43Q8BUM9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Gm22189-201ENSMUST00000103822 86 ntBASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Usp43Q8BUM9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms