Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14□□□□□ -0.17
Nup54Q8BTS4 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Gm28911-201ENSMUST00000188837 117 ntBASIC14□□□□□ -0.17
Nup54Q8BTS4 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14□□□□□ -0.17
Nup54Q8BTS4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14□□□□□ -0.17
Nup54Q8BTS4 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14□□□□□ -0.17
Nup54Q8BTS4 AC162801.1-201ENSMUST00000220612 198 ntBASIC14□□□□□ -0.17
Nup54Q8BTS4 AC140375.2-201ENSMUST00000225283 584 ntBASIC14□□□□□ -0.17
Nup54Q8BTS4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14□□□□□ -0.17
Nup54Q8BTS4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14□□□□□ -0.17
Nup54Q8BTS4 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Nup54Q8BTS4 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Nup54Q8BTS4 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14□□□□□ -0.17
Nup54Q8BTS4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Gm11424-201ENSMUST00000121929 829 ntBASIC13.99□□□□□ -0.17
Nup54Q8BTS4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nup54Q8BTS4 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Gm11918-201ENSMUST00000121660 179 ntBASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Gm38223-201ENSMUST00000194484 695 ntBASIC13.98□□□□□ -0.17
Nup54Q8BTS4 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Gm7653-201ENSMUST00000214567 508 ntBASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nup54Q8BTS4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms