Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Gm12957-201ENSMUST00000117835 377 ntBASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Scfd1Q8BRF7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Gm45841-201ENSMUST00000207700 164 ntBASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Scfd1Q8BRF7 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scfd1Q8BRF7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Scfd1Q8BRF7 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scfd1Q8BRF7 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scfd1Q8BRF7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scfd1Q8BRF7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scfd1Q8BRF7 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scfd1Q8BRF7 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Scfd1Q8BRF7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Scfd1Q8BRF7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
Scfd1Q8BRF7 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Scfd1Q8BRF7 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Gm10040-201ENSMUST00000080726 1662 ntBASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Mir1938-201ENSMUST00000158746 100 ntBASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Gm27331-201ENSMUST00000183705 60 ntBASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Gm43818-201ENSMUST00000200605 466 ntBASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Gm40466-201ENSMUST00000212174 422 ntBASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Scfd1Q8BRF7 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms