Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Samm50Q8BGH2 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Samm50Q8BGH2 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Samm50Q8BGH2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Samm50Q8BGH2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Samm50Q8BGH2 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Gm15653-201ENSMUST00000119247 907 ntBASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Gm27680-201ENSMUST00000184192 160 ntBASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Gm5320-201ENSMUST00000207163 1519 ntBASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Samm50Q8BGH2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Gm9063-201ENSMUST00000223299 582 ntBASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Samm50Q8BGH2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Samm50Q8BGH2 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms