Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Otop1Q80VM9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Gm12485-201ENSMUST00000119641 291 ntBASIC13.16□□□□□ -0.3
Otop1Q80VM9 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.16□□□□□ -0.3
Otop1Q80VM9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.16□□□□□ -0.3
Otop1Q80VM9 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Gm8927-201ENSMUST00000181978 981 ntBASIC13.16□□□□□ -0.3
Otop1Q80VM9 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Gm45880-201ENSMUST00000213041 853 ntBASIC13.16□□□□□ -0.3
Otop1Q80VM9 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.16□□□□□ -0.3
Otop1Q80VM9 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.16□□□□□ -0.3
Otop1Q80VM9 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Gm3222-201ENSMUST00000071282 990 ntBASIC13.16□□□□□ -0.3
Otop1Q80VM9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Otop1Q80VM9 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.15□□□□□ -0.3
Otop1Q80VM9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.15□□□□□ -0.3
Otop1Q80VM9 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Gm22331-201ENSMUST00000158066 136 ntBASIC13.15□□□□□ -0.3
Otop1Q80VM9 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.15□□□□□ -0.3
Otop1Q80VM9 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Gm44397-201ENSMUST00000195950 113 ntBASIC13.15□□□□□ -0.3
Otop1Q80VM9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Otop1Q80VM9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.15□□□□□ -0.3
Otop1Q80VM9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Otop1Q80VM9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Otop1Q80VM9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.14□□□□□ -0.31
Otop1Q80VM9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gm14723-201ENSMUST00000118686 215 ntBASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gm16177-201ENSMUST00000120728 718 ntBASIC13.14□□□□□ -0.31
Otop1Q80VM9 Mir3102-201ENSMUST00000175555 104 ntBASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gm24420-201ENSMUST00000176676 59 ntBASIC13.14□□□□□ -0.31
Otop1Q80VM9 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gm27772-201ENSMUST00000184900 187 ntBASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gm18827-201ENSMUST00000188341 790 ntBASIC13.14□□□□□ -0.31
Otop1Q80VM9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms