Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim62Q80V85 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim62Q80V85 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Mir7654-201ENSMUST00000185082 70 ntBASIC14.16□□□□□ -0.14
Trim62Q80V85 Gm38144-201ENSMUST00000192790 465 ntBASIC14.16□□□□□ -0.14
Trim62Q80V85 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Trim62Q80V85 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim62Q80V85 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Trim62Q80V85 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim62Q80V85 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.15□□□□□ -0.14
Trim62Q80V85 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.15□□□□□ -0.14
Trim62Q80V85 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.15□□□□□ -0.14
Trim62Q80V85 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim62Q80V85 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.15□□□□□ -0.14
Trim62Q80V85 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim62Q80V85 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim62Q80V85 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trim62Q80V85 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.14□□□□□ -0.15
Trim62Q80V85 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Gm15376-201ENSMUST00000122258 783 ntBASIC14.14□□□□□ -0.15
Trim62Q80V85 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Gm38223-201ENSMUST00000194484 695 ntBASIC14.14□□□□□ -0.15
Trim62Q80V85 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim62Q80V85 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim62Q80V85 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim62Q80V85 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim62Q80V85 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim62Q80V85 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms