Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prpf38bQ80SY5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Gm42790-201ENSMUST00000201268 969 ntBASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Gm3786-201ENSMUST00000202659 378 ntBASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Olfr286-202ENSMUST00000205305 969 ntBASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Gm45098-201ENSMUST00000207179 657 ntBASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prpf38bQ80SY5 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Gm29199-201ENSMUST00000187766 775 ntBASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prpf38bQ80SY5 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Gm14723-201ENSMUST00000118686 215 ntBASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.34□□□□□ -0.11
Prpf38bQ80SY5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms