Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ctdp1Q7TSG2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ctdp1Q7TSG2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Gm43474-201ENSMUST00000196415 774 ntBASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ctdp1Q7TSG2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Gm2810-201ENSMUST00000118681 990 ntBASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Gm10729-202ENSMUST00000193403 1375 ntBASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.92□□□□□ -0.02
Ctdp1Q7TSG2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms