Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm5637-201ENSMUST00000153890 1119 ntBASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm16379-201ENSMUST00000161469 348 ntBASIC12□□□□□ -0.49
Snrnp40Q6PE01 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm8762-201ENSMUST00000193486 339 ntBASIC12□□□□□ -0.49
Snrnp40Q6PE01 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm7619-201ENSMUST00000210649 1282 ntBASIC12□□□□□ -0.49
Snrnp40Q6PE01 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm4935-201ENSMUST00000221316 1198 ntBASIC12□□□□□ -0.49
Snrnp40Q6PE01 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm6203-201ENSMUST00000209575 1342 ntBASIC12□□□□□ -0.49
Snrnp40Q6PE01 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm45684-201ENSMUST00000210244 1571 ntBASIC12□□□□□ -0.49
Snrnp40Q6PE01 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Gm10040-201ENSMUST00000080726 1662 ntBASIC12□□□□□ -0.49
Snrnp40Q6PE01 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Snrnp40Q6PE01 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Gm27320-201ENSMUST00000184892 109 ntBASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Gm7895-201ENSMUST00000187459 1173 ntBASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Gm37259-201ENSMUST00000193903 849 ntBASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC11.99□□□□□ -0.49
Snrnp40Q6PE01 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Gm8337-201ENSMUST00000187358 1938 ntBASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Snrnp40Q6PE01 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms