Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Gm12329-201ENSMUST00000120829 1007 ntBASIC17.31■□□□□ 0.36
Clcn1Q64347 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC17.31■□□□□ 0.36
Clcn1Q64347 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.31■□□□□ 0.36
Clcn1Q64347 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Clcn1Q64347 Gm29608-201ENSMUST00000190444 463 ntBASIC17.31■□□□□ 0.36
Clcn1Q64347 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.31■□□□□ 0.36
Clcn1Q64347 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Clcn1Q64347 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcn1Q64347 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC17.3■□□□□ 0.36
Clcn1Q64347 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Mir698-201ENSMUST00000102164 109 ntBASIC17.3■□□□□ 0.36
Clcn1Q64347 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC17.3■□□□□ 0.36
Clcn1Q64347 Gm6152-201ENSMUST00000151704 340 ntBASIC17.3■□□□□ 0.36
Clcn1Q64347 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC17.3■□□□□ 0.36
Clcn1Q64347 Gm18473-201ENSMUST00000220543 868 ntBASIC17.3■□□□□ 0.36
Clcn1Q64347 Gm9257-201ENSMUST00000221254 232 ntBASIC17.3■□□□□ 0.36
Clcn1Q64347 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Clcn1Q64347 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Clcn1Q64347 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.3■□□□□ 0.36
Clcn1Q64347 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.3■□□□□ 0.36
Clcn1Q64347 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcn1Q64347 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC17.3■□□□□ 0.36
Clcn1Q64347 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clcn1Q64347 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Clcn1Q64347 Gm29705-201ENSMUST00000212598 474 ntBASIC17.29■□□□□ 0.36
Clcn1Q64347 Gm45930-201ENSMUST00000221330 292 ntBASIC17.29■□□□□ 0.36
Clcn1Q64347 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Gm24447-201ENSMUST00000083977 338 ntBASIC17.29■□□□□ 0.36
Clcn1Q64347 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC17.29■□□□□ 0.36
Clcn1Q64347 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Clcn1Q64347 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clcn1Q64347 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.29■□□□□ 0.36
Clcn1Q64347 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC17.29■□□□□ 0.36
Clcn1Q64347 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Clcn1Q64347 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcn1Q64347 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Clcn1Q64347 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcn1Q64347 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Clcn1Q64347 Gm22018-201ENSMUST00000104357 131 ntBASIC17.28■□□□□ 0.36
Clcn1Q64347 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcn1Q64347 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms