Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.55□□□□□ -0.4
VcanQ62059 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.55□□□□□ -0.4
VcanQ62059 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.55□□□□□ -0.4
VcanQ62059 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
VcanQ62059 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.55□□□□□ -0.4
VcanQ62059 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.55□□□□□ -0.4
VcanQ62059 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.55□□□□□ -0.4
VcanQ62059 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.55□□□□□ -0.4
VcanQ62059 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.55□□□□□ -0.4
VcanQ62059 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.55□□□□□ -0.4
VcanQ62059 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
VcanQ62059 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
VcanQ62059 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VcanQ62059 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
VcanQ62059 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.54□□□□□ -0.4
VcanQ62059 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.54□□□□□ -0.4
VcanQ62059 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.54□□□□□ -0.4
VcanQ62059 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
VcanQ62059 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.54□□□□□ -0.4
VcanQ62059 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC12.54□□□□□ -0.4
VcanQ62059 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.54□□□□□ -0.4
VcanQ62059 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.54□□□□□ -0.4
VcanQ62059 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
VcanQ62059 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VcanQ62059 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.54□□□□□ -0.4
VcanQ62059 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.54□□□□□ -0.4
VcanQ62059 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VcanQ62059 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.53□□□□□ -0.4
VcanQ62059 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.53□□□□□ -0.4
VcanQ62059 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VcanQ62059 Gm5950-201ENSMUST00000213337 772 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
VcanQ62059 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VcanQ62059 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.53□□□□□ -0.4
VcanQ62059 Gm9062-201ENSMUST00000117712 727 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Gm31256-201ENSMUST00000194705 506 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Gm17889-201ENSMUST00000198410 598 ntBASIC12.53□□□□□ -0.4
VcanQ62059 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Acot6-202ENSMUST00000222921 3622 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
VcanQ62059 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.53□□□□□ -0.4
VcanQ62059 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcanQ62059 Gm23270-201ENSMUST00000104055 131 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC12.53□□□□□ -0.4
VcanQ62059 Gm25700-201ENSMUST00000177693 110 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Mir6546-201ENSMUST00000184460 62 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Gm7902-201ENSMUST00000198842 947 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Gm7848-201ENSMUST00000210739 718 ntBASIC12.53□□□□□ -0.4
VcanQ62059 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms