Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sox17Q61473 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.83□□□□□ -0.36
Sox17Q61473 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
Sox17Q61473 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox17Q61473 Gm17971-201ENSMUST00000190239 806 ntBASIC12.83□□□□□ -0.36
Sox17Q61473 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sox17Q61473 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.83□□□□□ -0.36
Sox17Q61473 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC12.83□□□□□ -0.36
Sox17Q61473 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox17Q61473 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox17Q61473 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox17Q61473 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox17Q61473 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox17Q61473 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Sox17Q61473 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox17Q61473 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.82□□□□□ -0.36
Sox17Q61473 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.82□□□□□ -0.36
Sox17Q61473 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Ighv8-14-201ENSMUST00000196781 358 ntBASIC12.82□□□□□ -0.36
Sox17Q61473 Gm20553-201ENSMUST00000204205 844 ntBASIC12.82□□□□□ -0.36
Sox17Q61473 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.82□□□□□ -0.36
Sox17Q61473 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.82□□□□□ -0.36
Sox17Q61473 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox17Q61473 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox17Q61473 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Sox17Q61473 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.81□□□□□ -0.36
Sox17Q61473 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Sox17Q61473 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sox17Q61473 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.81□□□□□ -0.36
Sox17Q61473 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Sox17Q61473 Gm29310-201ENSMUST00000185468 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21825-201ENSMUST00000185728 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm29109-201ENSMUST00000185895 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21896-201ENSMUST00000186520 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21873-201ENSMUST00000186728 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21794-201ENSMUST00000187056 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21880-201ENSMUST00000187275 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21826-201ENSMUST00000187451 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21198-201ENSMUST00000188393 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21749-201ENSMUST00000189343 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21901-201ENSMUST00000189568 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm29424-201ENSMUST00000189716 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm28599-201ENSMUST00000189838 694 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21867-201ENSMUST00000189917 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm29269-201ENSMUST00000190087 696 ntBASIC12.81□□□□□ -0.36
Sox17Q61473 Gm21722-201ENSMUST00000190153 696 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms