Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm17870-201ENSMUST00000219489 1174 ntBASIC14.24□□□□□ -0.13
Smarcd1Q61466 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smarcd1Q61466 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.23□□□□□ -0.13
Smarcd1Q61466 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.23□□□□□ -0.13
Smarcd1Q61466 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Gm8463-201ENSMUST00000208573 613 ntBASIC14.23□□□□□ -0.13
Smarcd1Q61466 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Gm5356-201ENSMUST00000093326 615 ntBASIC14.23□□□□□ -0.13
Smarcd1Q61466 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.23□□□□□ -0.13
Smarcd1Q61466 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.23□□□□□ -0.13
Smarcd1Q61466 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smarcd1Q61466 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Gm12928-201ENSMUST00000117115 573 ntBASIC14.22□□□□□ -0.13
Smarcd1Q61466 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Gm38144-201ENSMUST00000192790 465 ntBASIC14.22□□□□□ -0.13
Smarcd1Q61466 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcd1Q61466 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.22□□□□□ -0.13
Smarcd1Q61466 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smarcd1Q61466 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms