Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Gm15393-201ENSMUST00000120499 219 ntBASIC13.38□□□□□ -0.27
Vsx2Q61412 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.38□□□□□ -0.27
Vsx2Q61412 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vsx2Q61412 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.38□□□□□ -0.27
Vsx2Q61412 Gm44608-201ENSMUST00000206827 855 ntBASIC13.38□□□□□ -0.27
Vsx2Q61412 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC13.38□□□□□ -0.27
Vsx2Q61412 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.38□□□□□ -0.27
Vsx2Q61412 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.38□□□□□ -0.27
Vsx2Q61412 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vsx2Q61412 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Vsx2Q61412 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Vsx2Q61412 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.38□□□□□ -0.27
Vsx2Q61412 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Vsx2Q61412 Syt7-204ENSMUST00000223586 1344 ntBASIC13.38□□□□□ -0.27
Vsx2Q61412 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.37□□□□□ -0.27
Vsx2Q61412 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.37□□□□□ -0.27
Vsx2Q61412 Gm16215-201ENSMUST00000161990 637 ntBASIC13.37□□□□□ -0.27
Vsx2Q61412 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Vsx2Q61412 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Gm27437-201ENSMUST00000183429 107 ntBASIC13.37□□□□□ -0.27
Vsx2Q61412 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Vsx2Q61412 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.37□□□□□ -0.27
Vsx2Q61412 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC13.37□□□□□ -0.27
Vsx2Q61412 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.37□□□□□ -0.27
Vsx2Q61412 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Vsx2Q61412 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Vsx2Q61412 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Vsx2Q61412 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Vsx2Q61412 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vsx2Q61412 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.36□□□□□ -0.27
Vsx2Q61412 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Vsx2Q61412 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.36□□□□□ -0.27
Vsx2Q61412 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.36□□□□□ -0.27
Vsx2Q61412 Gm29667-201ENSMUST00000190817 490 ntBASIC13.36□□□□□ -0.27
Vsx2Q61412 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.36□□□□□ -0.27
Vsx2Q61412 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.36□□□□□ -0.27
Vsx2Q61412 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Vsx2Q61412 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.36□□□□□ -0.27
Vsx2Q61412 Gm20445-201ENSMUST00000061905 565 ntBASIC13.36□□□□□ -0.27
Vsx2Q61412 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.36□□□□□ -0.27
Vsx2Q61412 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Vsx2Q61412 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.36□□□□□ -0.27
Vsx2Q61412 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vsx2Q61412 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.35□□□□□ -0.27
Vsx2Q61412 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms