Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.4■□□□□ 0.22
Mre11Q61216 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Mre11Q61216 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Mre11Q61216 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Gm15957-201ENSMUST00000118893 974 ntBASIC16.4■□□□□ 0.22
Mre11Q61216 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Birc2-201ENSMUST00000054878 378 ntBASIC16.4■□□□□ 0.22
Mre11Q61216 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Mre11Q61216 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Gm9279-201ENSMUST00000223175 1606 ntBASIC16.4■□□□□ 0.22
Mre11Q61216 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Mre11Q61216 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC16.4■□□□□ 0.22
Mre11Q61216 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mre11Q61216 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Mre11Q61216 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Mre11Q61216 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Mre11Q61216 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 AC151895.1-201ENSMUST00000219025 1742 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Mre11Q61216 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.39■□□□□ 0.21
Mre11Q61216 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.39■□□□□ 0.21
Mre11Q61216 Gm6546-201ENSMUST00000192096 766 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44357-201ENSMUST00000195897 142 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm19658-201ENSMUST00000196231 138 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44367-201ENSMUST00000196836 138 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44350-201ENSMUST00000197197 138 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44390-201ENSMUST00000197533 144 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44313-201ENSMUST00000198018 138 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44486-201ENSMUST00000198508 138 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44314-201ENSMUST00000199263 138 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44394-201ENSMUST00000199558 138 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44484-201ENSMUST00000199873 138 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm43347-201ENSMUST00000200226 580 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44466-201ENSMUST00000200264 138 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 Gm44359-201ENSMUST00000200671 138 ntBASIC16.39■□□□□ 0.21
Mre11Q61216 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Mre11Q61216 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mre11Q61216 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Mre11Q61216 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.38■□□□□ 0.21
Mre11Q61216 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Mre11Q61216 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC16.38■□□□□ 0.21
Mre11Q61216 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Mre11Q61216 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Gm44851-201ENSMUST00000205735 2309 ntBASIC16.38■□□□□ 0.21
Mre11Q61216 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC16.38■□□□□ 0.21
Mre11Q61216 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.38■□□□□ 0.21
Mre11Q61216 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.38■□□□□ 0.21
Mre11Q61216 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.38■□□□□ 0.21
Mre11Q61216 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Mre11Q61216 Gm8337-201ENSMUST00000187358 1938 ntBASIC16.38■□□□□ 0.21
Mre11Q61216 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Mre11Q61216 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mre11Q61216 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms