Protein–RNA interactions for Protein: Q60803

Traf3, TNF receptor-associated factor 3, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3Q60803 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Traf3Q60803 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Traf3Q60803 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.33□□□□□ -0.12
Traf3Q60803 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Traf3Q60803 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Traf3Q60803 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Traf3Q60803 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Traf3Q60803 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Traf3Q60803 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Traf3Q60803 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Traf3Q60803 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.33□□□□□ -0.12
Traf3Q60803 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Traf3Q60803 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.32□□□□□ -0.12
Traf3Q60803 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Traf3Q60803 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Traf3Q60803 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Traf3Q60803 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Traf3Q60803 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.32□□□□□ -0.12
Traf3Q60803 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Traf3Q60803 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Traf3Q60803 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Traf3Q60803 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Traf3Q60803 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Traf3Q60803 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Traf3Q60803 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Traf3Q60803 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.31□□□□□ -0.12
Traf3Q60803 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.31□□□□□ -0.12
Traf3Q60803 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Traf3Q60803 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.31□□□□□ -0.12
Traf3Q60803 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.31□□□□□ -0.12
Traf3Q60803 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.31□□□□□ -0.12
Traf3Q60803 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Traf3Q60803 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Traf3Q60803 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Traf3Q60803 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.31□□□□□ -0.12
Traf3Q60803 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.31□□□□□ -0.12
Traf3Q60803 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.31□□□□□ -0.12
Traf3Q60803 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.31□□□□□ -0.12
Traf3Q60803 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.31□□□□□ -0.12
Traf3Q60803 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Traf3Q60803 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Traf3Q60803 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.31□□□□□ -0.12
Traf3Q60803 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Traf3Q60803 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.31□□□□□ -0.12
Traf3Q60803 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Traf3Q60803 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf3Q60803 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf3Q60803 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf3Q60803 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Traf3Q60803 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf3Q60803 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf3Q60803 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf3Q60803 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf3Q60803 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf3Q60803 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf3Q60803 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Traf3Q60803 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms