Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.28□□□□□ -0.12
Foxd4Q60688 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd4Q60688 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.28□□□□□ -0.12
Foxd4Q60688 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Foxd4Q60688 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Foxd4Q60688 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Foxd4Q60688 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.27□□□□□ -0.12
Foxd4Q60688 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.27□□□□□ -0.13
Foxd4Q60688 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Gm14042-201ENSMUST00000120139 833 ntBASIC14.27□□□□□ -0.13
Foxd4Q60688 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Foxd4Q60688 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Foxd4Q60688 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Foxd4Q60688 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Gm5312-201ENSMUST00000203728 547 ntBASIC14.27□□□□□ -0.13
Foxd4Q60688 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 CT572999.1-201ENSMUST00000220315 1260 ntBASIC14.27□□□□□ -0.13
Foxd4Q60688 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Foxd4Q60688 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Foxd4Q60688 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Foxd4Q60688 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.27□□□□□ -0.13
Foxd4Q60688 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm13255-201ENSMUST00000117255 547 ntBASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm4732-201ENSMUST00000118778 473 ntBASIC14.26□□□□□ -0.13
Foxd4Q60688 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.26□□□□□ -0.13
Foxd4Q60688 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm11543-201ENSMUST00000120758 370 ntBASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.26□□□□□ -0.13
Foxd4Q60688 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm37857-201ENSMUST00000191784 1199 ntBASIC14.26□□□□□ -0.13
Foxd4Q60688 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm43906-201ENSMUST00000203194 906 ntBASIC14.26□□□□□ -0.13
Foxd4Q60688 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm20949-201ENSMUST00000206478 952 ntBASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm45909-201ENSMUST00000212413 1031 ntBASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.26□□□□□ -0.13
Foxd4Q60688 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
Foxd4Q60688 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Foxd4Q60688 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Foxd4Q60688 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.25□□□□□ -0.13
Foxd4Q60688 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.25□□□□□ -0.13
Foxd4Q60688 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Foxd4Q60688 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Foxd4Q60688 Olfr362-201ENSMUST00000100144 954 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Foxd4Q60688 Gm12372-201ENSMUST00000121654 768 ntBASIC14.25□□□□□ -0.13
Foxd4Q60688 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.25□□□□□ -0.13
Foxd4Q60688 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms