Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.57□□□□□ -0.24
Scn2bQ56A07 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Scn2bQ56A07 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.56□□□□□ -0.24
Scn2bQ56A07 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Gm15693-201ENSMUST00000120470 637 ntBASIC13.56□□□□□ -0.24
Scn2bQ56A07 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.56□□□□□ -0.24
Scn2bQ56A07 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Scn2bQ56A07 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Gm29741-201ENSMUST00000192667 421 ntBASIC13.55□□□□□ -0.24
Scn2bQ56A07 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Scn2bQ56A07 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.54□□□□□ -0.24
Scn2bQ56A07 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Gm9719-201ENSMUST00000162765 543 ntBASIC13.54□□□□□ -0.24
Scn2bQ56A07 Gm37714-201ENSMUST00000194742 342 ntBASIC13.54□□□□□ -0.24
Scn2bQ56A07 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Scn2bQ56A07 Gm18027-201ENSMUST00000218947 619 ntBASIC13.54□□□□□ -0.24
Scn2bQ56A07 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms