Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Gm11814-201ENSMUST00000119515 929 ntBASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Gm27486-201ENSMUST00000184923 80 ntBASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Gm38671-201ENSMUST00000200573 130 ntBASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rc3h1Q4VGL6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Gm18062-201ENSMUST00000208020 547 ntBASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Gm18055-201ENSMUST00000208254 547 ntBASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Gm8598-201ENSMUST00000221184 836 ntBASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Gm6091-201ENSMUST00000098307 165 ntBASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.79■□□□□ 0.12
Rc3h1Q4VGL6 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rc3h1Q4VGL6 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms