Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Prpf38aQ4FK66 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Prpf38aQ4FK66 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Prpf38aQ4FK66 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Prpf38aQ4FK66 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Gm6152-201ENSMUST00000151704 340 ntBASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Mir1982-201ENSMUST00000157368 74 ntBASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Gm6091-201ENSMUST00000098307 165 ntBASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Prpf38aQ4FK66 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Gm5687-201ENSMUST00000118252 640 ntBASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Gm24196-201ENSMUST00000179161 110 ntBASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Prpf38aQ4FK66 Gm29608-201ENSMUST00000190444 463 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms