Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Gm38042-201ENSMUST00000191614 5208 ntBASIC16.3■□□□□ 0.2
SfswapQ3USH5 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SfswapQ3USH5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Mir1982-201ENSMUST00000157368 74 ntBASIC16.29■□□□□ 0.2
SfswapQ3USH5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.29■□□□□ 0.2
SfswapQ3USH5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC16.29■□□□□ 0.2
SfswapQ3USH5 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Gm24447-201ENSMUST00000083977 338 ntBASIC16.29■□□□□ 0.2
SfswapQ3USH5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.29■□□□□ 0.2
SfswapQ3USH5 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SfswapQ3USH5 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Gm15770-201ENSMUST00000117498 584 ntBASIC16.28■□□□□ 0.2
SfswapQ3USH5 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Gm27847-201ENSMUST00000183711 107 ntBASIC16.28■□□□□ 0.2
SfswapQ3USH5 Gm27375-201ENSMUST00000183799 107 ntBASIC16.28■□□□□ 0.2
SfswapQ3USH5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.28■□□□□ 0.2
SfswapQ3USH5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Gm6091-201ENSMUST00000098307 165 ntBASIC16.28■□□□□ 0.2
SfswapQ3USH5 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.28■□□□□ 0.2
SfswapQ3USH5 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SfswapQ3USH5 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.27■□□□□ 0.2
SfswapQ3USH5 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.27■□□□□ 0.2
SfswapQ3USH5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Gm11814-201ENSMUST00000119515 929 ntBASIC16.27■□□□□ 0.2
SfswapQ3USH5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC16.27■□□□□ 0.2
SfswapQ3USH5 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Gm29608-201ENSMUST00000190444 463 ntBASIC16.27■□□□□ 0.2
SfswapQ3USH5 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SfswapQ3USH5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SfswapQ3USH5 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SfswapQ3USH5 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SfswapQ3USH5 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SfswapQ3USH5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SfswapQ3USH5 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms