Protein–RNA interactions for Protein: Q3UEB3

Puf60, Poly(U)-binding-splicing factor PUF60, mousemouse

Known RBP Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Puf60Q3UEB3 Gm16372-201ENSMUST00000073088 450 ntBASIC18.7■□□□□ 0.58
Puf60Q3UEB3 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Puf60Q3UEB3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Puf60Q3UEB3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Puf60Q3UEB3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Puf60Q3UEB3 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Puf60Q3UEB3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Puf60Q3UEB3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Puf60Q3UEB3 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Puf60Q3UEB3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Puf60Q3UEB3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Puf60Q3UEB3 Nupl1-207ENSMUST00000225311 2475 ntBASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Gm25927-201ENSMUST00000175058 117 ntBASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Gm27516-201ENSMUST00000184237 98 ntBASIC18.69■□□□□ 0.58
Puf60Q3UEB3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Gm44069-201ENSMUST00000204898 506 ntBASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Gm17383-201ENSMUST00000078739 1041 ntBASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Puf60Q3UEB3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Gm5850-201ENSMUST00000192923 1206 ntBASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 AC140406.1-201ENSMUST00000226481 465 ntBASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Puf60Q3UEB3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Gm43133-201ENSMUST00000197472 463 ntBASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC18.67■□□□□ 0.58
Puf60Q3UEB3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Puf60Q3UEB3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Puf60Q3UEB3 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Puf60Q3UEB3 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Puf60Q3UEB3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
Puf60Q3UEB3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Puf60Q3UEB3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Puf60Q3UEB3 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Puf60Q3UEB3 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC18.66■□□□□ 0.58
Puf60Q3UEB3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Puf60Q3UEB3 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms