Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Gm14208-201ENSMUST00000119645 678 ntBASIC16.03■□□□□ 0.16
Col5a2Q3U962 Gm11978-201ENSMUST00000122315 466 ntBASIC16.03■□□□□ 0.16
Col5a2Q3U962 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC16.03■□□□□ 0.16
Col5a2Q3U962 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col5a2Q3U962 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Col5a2Q3U962 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.02■□□□□ 0.15
Col5a2Q3U962 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Gm10434-201ENSMUST00000101158 471 ntBASIC16.02■□□□□ 0.15
Col5a2Q3U962 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Gm8805-201ENSMUST00000117848 313 ntBASIC16.02■□□□□ 0.15
Col5a2Q3U962 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Mir7032-201ENSMUST00000185154 79 ntBASIC16.02■□□□□ 0.15
Col5a2Q3U962 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Gm9004-201ENSMUST00000218739 1222 ntBASIC16.02■□□□□ 0.15
Col5a2Q3U962 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.02■□□□□ 0.15
Col5a2Q3U962 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col5a2Q3U962 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.01■□□□□ 0.15
Col5a2Q3U962 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC16.01■□□□□ 0.15
Col5a2Q3U962 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Col5a2Q3U962 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Gm8176-201ENSMUST00000191297 1099 ntBASIC16.01■□□□□ 0.15
Col5a2Q3U962 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.01■□□□□ 0.15
Col5a2Q3U962 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 AC153974.2-201ENSMUST00000218577 1025 ntBASIC16.01■□□□□ 0.15
Col5a2Q3U962 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 AC167669.2-201ENSMUST00000224417 1620 ntBASIC16.01■□□□□ 0.15
Col5a2Q3U962 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Col5a2Q3U962 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Col5a2Q3U962 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Col5a2Q3U962 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Col5a2Q3U962 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16■□□□□ 0.15
Col5a2Q3U962 Gm8862-201ENSMUST00000198379 1346 ntBASIC16■□□□□ 0.15
Col5a2Q3U962 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16■□□□□ 0.15
Col5a2Q3U962 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms