Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Q3U1D9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Q3U1D9 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.89□□□□□ -0.51
Q3U1D9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Q3U1D9 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Q3U1D9 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.88□□□□□ -0.51
Q3U1D9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.88□□□□□ -0.51
Q3U1D9 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.88□□□□□ -0.51
Q3U1D9 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Gm11814-201ENSMUST00000119515 929 ntBASIC11.88□□□□□ -0.51
Q3U1D9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.88□□□□□ -0.51
Q3U1D9 Gm43438-201ENSMUST00000198133 379 ntBASIC11.88□□□□□ -0.51
Q3U1D9 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.88□□□□□ -0.51
Q3U1D9 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.88□□□□□ -0.51
Q3U1D9 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.88□□□□□ -0.51
Q3U1D9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC11.88□□□□□ -0.51
Q3U1D9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Q3U1D9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Q3U1D9 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Q3U1D9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.87□□□□□ -0.51
Q3U1D9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.87□□□□□ -0.51
Q3U1D9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.87□□□□□ -0.51
Q3U1D9 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.87□□□□□ -0.51
Q3U1D9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC11.87□□□□□ -0.51
Q3U1D9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Q3U1D9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC11.87□□□□□ -0.51
Q3U1D9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.87□□□□□ -0.51
Q3U1D9 Gm38671-201ENSMUST00000200573 130 ntBASIC11.87□□□□□ -0.51
Q3U1D9 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.87□□□□□ -0.51
Q3U1D9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Q3U1D9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.87□□□□□ -0.51
Q3U1D9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms