Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Q3KNL4 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.46□□□□□ -0.25
Q3KNL4 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Q3KNL4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Q3KNL4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.26
Q3KNL4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Q3KNL4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Q3KNL4 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Q3KNL4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Q3KNL4 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Q3KNL4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Q3KNL4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Q3KNL4 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Q3KNL4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.45□□□□□ -0.26
Q3KNL4 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Q3KNL4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Q3KNL4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.45□□□□□ -0.26
Q3KNL4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.45□□□□□ -0.26
Q3KNL4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.45□□□□□ -0.26
Q3KNL4 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Q3KNL4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.45□□□□□ -0.26
Q3KNL4 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Q3KNL4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Q3KNL4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Q3KNL4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Q3KNL4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Q3KNL4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.44□□□□□ -0.26
Q3KNL4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Q3KNL4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Q3KNL4 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Q3KNL4 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Q3KNL4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Q3KNL4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Q3KNL4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Q3KNL4 Gm22065-201ENSMUST00000103753 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm22066-201ENSMUST00000103761 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm24932-201ENSMUST00000103763 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm24115-201ENSMUST00000103799 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm22190-201ENSMUST00000103827 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm22191-201ENSMUST00000103831 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm24721-201ENSMUST00000103849 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm28018-201ENSMUST00000103869 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm26399-201ENSMUST00000103937 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Q3KNL4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Q3KNL4 Gm8410-201ENSMUST00000117225 605 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Q3KNL4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Q3KNL4 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Q3KNL4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.44□□□□□ -0.26
Q3KNL4 Gm25349-201ENSMUST00000177728 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm23616-201ENSMUST00000177797 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm25871-201ENSMUST00000177816 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm24752-201ENSMUST00000178240 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm24496-201ENSMUST00000178287 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm25649-201ENSMUST00000178476 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm25548-201ENSMUST00000178681 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm23147-201ENSMUST00000178841 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm26095-201ENSMUST00000179270 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm22171-201ENSMUST00000179283 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm23936-201ENSMUST00000179354 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm22619-201ENSMUST00000179516 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm25255-201ENSMUST00000179579 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm24755-201ENSMUST00000179691 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm26506-201ENSMUST00000179692 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm25086-201ENSMUST00000179931 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm23243-201ENSMUST00000180047 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm24659-201ENSMUST00000180212 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm24169-201ENSMUST00000180244 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm23689-201ENSMUST00000180354 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm27359-201ENSMUST00000184153 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm27785-201ENSMUST00000184268 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm27466-201ENSMUST00000184396 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm27703-201ENSMUST00000184836 110 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Gm6916-202ENSMUST00000205523 195 ntBASIC13.44□□□□□ -0.26
Q3KNL4 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms