Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.25□□□□□ -0.61
Trim63Q38HM4 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim63Q38HM4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC11.24□□□□□ -0.61
Trim63Q38HM4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.24□□□□□ -0.61
Trim63Q38HM4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trim63Q38HM4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.24□□□□□ -0.61
Trim63Q38HM4 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.24□□□□□ -0.61
Trim63Q38HM4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trim63Q38HM4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.23□□□□□ -0.61
Trim63Q38HM4 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.23□□□□□ -0.61
Trim63Q38HM4 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trim63Q38HM4 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trim63Q38HM4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms