Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Ptchd3Q0EEE2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Gm18737-201ENSMUST00000173594 937 ntBASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Gm18889-201ENSMUST00000174284 929 ntBASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Gm38225-201ENSMUST00000194001 393 ntBASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Ptchd3Q0EEE2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC13.22□□□□□ -0.29
Ptchd3Q0EEE2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Ptchd3Q0EEE2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms