Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chd8Q09XV5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Chd8Q09XV5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC12.12□□□□□ -0.47
Chd8Q09XV5 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Gm14219-201ENSMUST00000120414 288 ntBASIC12.12□□□□□ -0.47
Chd8Q09XV5 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.12□□□□□ -0.47
Chd8Q09XV5 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Trav11n-201ENSMUST00000200113 343 ntBASIC12.12□□□□□ -0.47
Chd8Q09XV5 Gm18463-201ENSMUST00000207258 474 ntBASIC12.12□□□□□ -0.47
Chd8Q09XV5 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Gm15036-201ENSMUST00000118880 400 ntBASIC12.12□□□□□ -0.47
Chd8Q09XV5 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.12□□□□□ -0.47
Chd8Q09XV5 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.12□□□□□ -0.47
Chd8Q09XV5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chd8Q09XV5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC12.11□□□□□ -0.47
Chd8Q09XV5 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Gm15515-201ENSMUST00000117827 822 ntBASIC12.11□□□□□ -0.47
Chd8Q09XV5 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC12.11□□□□□ -0.47
Chd8Q09XV5 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Snora73b-201ENSMUST00000083419 205 ntBASIC12.11□□□□□ -0.47
Chd8Q09XV5 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Shroom3-211ENSMUST00000225438 5742 ntBASIC12.11□□□□□ -0.47
Chd8Q09XV5 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.11□□□□□ -0.47
Chd8Q09XV5 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.11□□□□□ -0.47
Chd8Q09XV5 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chd8Q09XV5 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Chd8Q09XV5 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms