Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Col9a2Q07643 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Col9a2Q07643 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Col9a2Q07643 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.79□□□□□ -0.04
Col9a2Q07643 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
Col9a2Q07643 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.79□□□□□ -0.04
Col9a2Q07643 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Col9a2Q07643 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Col9a2Q07643 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Gm27731-201ENSMUST00000185192 107 ntBASIC14.79□□□□□ -0.04
Col9a2Q07643 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.79□□□□□ -0.04
Col9a2Q07643 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.79□□□□□ -0.04
Col9a2Q07643 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.79□□□□□ -0.04
Col9a2Q07643 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.79□□□□□ -0.04
Col9a2Q07643 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.79□□□□□ -0.04
Col9a2Q07643 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Col9a2Q07643 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col9a2Q07643 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Col9a2Q07643 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.79□□□□□ -0.04
Col9a2Q07643 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Col9a2Q07643 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Col9a2Q07643 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.78□□□□□ -0.04
Col9a2Q07643 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Gm15371-201ENSMUST00000117057 784 ntBASIC14.78□□□□□ -0.04
Col9a2Q07643 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.78□□□□□ -0.04
Col9a2Q07643 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.78□□□□□ -0.04
Col9a2Q07643 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col9a2Q07643 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.78□□□□□ -0.04
Col9a2Q07643 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Col9a2Q07643 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Col9a2Q07643 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col9a2Q07643 Acot6-202ENSMUST00000222921 3622 ntBASIC14.78□□□□□ -0.04
Col9a2Q07643 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Col9a2Q07643 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Col9a2Q07643 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Col9a2Q07643 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a2Q07643 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Col9a2Q07643 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a2Q07643 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a2Q07643 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a2Q07643 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a2Q07643 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a2Q07643 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.77□□□□□ -0.04
Col9a2Q07643 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a2Q07643 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a2Q07643 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a2Q07643 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Col9a2Q07643 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Col9a2Q07643 Gm12203-201ENSMUST00000118235 598 ntBASIC14.77□□□□□ -0.05
Col9a2Q07643 Gm12209-201ENSMUST00000120089 596 ntBASIC14.77□□□□□ -0.05
Col9a2Q07643 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.77□□□□□ -0.05
Col9a2Q07643 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.77□□□□□ -0.05
Col9a2Q07643 Gm24644-201ENSMUST00000157114 139 ntBASIC14.77□□□□□ -0.05
Col9a2Q07643 Gm27331-201ENSMUST00000183705 60 ntBASIC14.77□□□□□ -0.05
Col9a2Q07643 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms