Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.22□□□□□ -0.45
SgcbP82349 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.22□□□□□ -0.45
SgcbP82349 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
SgcbP82349 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.22□□□□□ -0.45
SgcbP82349 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.22□□□□□ -0.45
SgcbP82349 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SgcbP82349 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.22□□□□□ -0.45
SgcbP82349 Gm5354-201ENSMUST00000182417 973 ntBASIC12.22□□□□□ -0.45
SgcbP82349 Gm2445-201ENSMUST00000182798 989 ntBASIC12.22□□□□□ -0.45
SgcbP82349 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.22□□□□□ -0.45
SgcbP82349 Gm27772-201ENSMUST00000184900 187 ntBASIC12.22□□□□□ -0.45
SgcbP82349 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.22□□□□□ -0.45
SgcbP82349 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.22□□□□□ -0.45
SgcbP82349 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SgcbP82349 Gm32390-201ENSMUST00000212713 1172 ntBASIC12.22□□□□□ -0.45
SgcbP82349 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.22□□□□□ -0.45
SgcbP82349 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.22□□□□□ -0.45
SgcbP82349 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.22□□□□□ -0.45
SgcbP82349 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
SgcbP82349 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.22□□□□□ -0.45
SgcbP82349 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SgcbP82349 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
SgcbP82349 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
SgcbP82349 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.21□□□□□ -0.45
SgcbP82349 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.21□□□□□ -0.45
SgcbP82349 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.21□□□□□ -0.45
SgcbP82349 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Mir6392-201ENSMUST00000184924 108 ntBASIC12.21□□□□□ -0.45
SgcbP82349 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.21□□□□□ -0.45
SgcbP82349 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
SgcbP82349 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SgcbP82349 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcbP82349 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcbP82349 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.46
SgcbP82349 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SgcbP82349 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SgcbP82349 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcbP82349 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcbP82349 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SgcbP82349 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
SgcbP82349 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SgcbP82349 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.21□□□□□ -0.46
SgcbP82349 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Gm15240-201ENSMUST00000118156 720 ntBASIC12.2□□□□□ -0.46
SgcbP82349 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.2□□□□□ -0.46
SgcbP82349 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms