Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.81□□□□□ -0.04
CiitaP79621 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CiitaP79621 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Gm13829-201ENSMUST00000119600 138 ntBASIC14.81□□□□□ -0.04
CiitaP79621 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC14.81□□□□□ -0.04
CiitaP79621 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CiitaP79621 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.81□□□□□ -0.04
CiitaP79621 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.81□□□□□ -0.04
CiitaP79621 Gm18473-201ENSMUST00000220543 868 ntBASIC14.81□□□□□ -0.04
CiitaP79621 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.81□□□□□ -0.04
CiitaP79621 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
CiitaP79621 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CiitaP79621 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
CiitaP79621 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
CiitaP79621 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.8□□□□□ -0.04
CiitaP79621 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CiitaP79621 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Gm11814-201ENSMUST00000119515 929 ntBASIC14.8□□□□□ -0.04
CiitaP79621 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.8□□□□□ -0.04
CiitaP79621 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.8□□□□□ -0.04
CiitaP79621 Gm29608-201ENSMUST00000190444 463 ntBASIC14.8□□□□□ -0.04
CiitaP79621 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CiitaP79621 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.8□□□□□ -0.04
CiitaP79621 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.8□□□□□ -0.04
CiitaP79621 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.8□□□□□ -0.04
CiitaP79621 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
CiitaP79621 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.8□□□□□ -0.04
CiitaP79621 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CiitaP79621 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CiitaP79621 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CiitaP79621 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
CiitaP79621 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CiitaP79621 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.79□□□□□ -0.04
CiitaP79621 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.79□□□□□ -0.04
CiitaP79621 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.79□□□□□ -0.04
CiitaP79621 Gm8652-201ENSMUST00000181363 964 ntBASIC14.79□□□□□ -0.04
CiitaP79621 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.79□□□□□ -0.04
CiitaP79621 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
CiitaP79621 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
CiitaP79621 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CiitaP79621 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CiitaP79621 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC14.78□□□□□ -0.04
CiitaP79621 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms