Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.04□□□□□ -0.48
Lsm6P62313 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Lsm6P62313 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.04□□□□□ -0.48
Lsm6P62313 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lsm6P62313 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lsm6P62313 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm6P62313 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.03□□□□□ -0.48
Lsm6P62313 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.03□□□□□ -0.48
Lsm6P62313 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Gm4875-201ENSMUST00000118257 786 ntBASIC12.03□□□□□ -0.48
Lsm6P62313 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm6P62313 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm6P62313 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm6P62313 Mir6956-201ENSMUST00000183598 62 ntBASIC12.03□□□□□ -0.48
Lsm6P62313 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.03□□□□□ -0.48
Lsm6P62313 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm6P62313 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.03□□□□□ -0.48
Lsm6P62313 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lsm6P62313 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Lsm6P62313 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Lsm6P62313 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.03□□□□□ -0.48
Lsm6P62313 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.03□□□□□ -0.48
Lsm6P62313 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Lsm6P62313 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.03□□□□□ -0.48
Lsm6P62313 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Lsm6P62313 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lsm6P62313 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm6P62313 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm6P62313 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm6P62313 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Lsm6P62313 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm6P62313 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lsm6P62313 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lsm6P62313 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.02□□□□□ -0.49
Lsm6P62313 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Gm15920-201ENSMUST00000118998 402 ntBASIC12.02□□□□□ -0.49
Lsm6P62313 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Lsm6P62313 Gm25925-201ENSMUST00000158314 306 ntBASIC12.02□□□□□ -0.49
Lsm6P62313 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Gm18905-201ENSMUST00000205454 928 ntBASIC12.02□□□□□ -0.49
Lsm6P62313 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.02□□□□□ -0.49
Lsm6P62313 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.02□□□□□ -0.49
Lsm6P62313 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Lsm6P62313 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lsm6P62313 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms